* feat(application): wire Android and Apple inventory graph tools
Expose project_android_application_graph and project_apple_application_graph
through CLI and MCP so authenticated inventory Evidence can be projected
without a provider launch.
* fix(application): use producer root occurrence IDs in graph examples
Catalog examples constructed root occurrence IDs from artifact_id +
logical_path, but inventory validation authenticates "." with
{ root: root_artifact_id }. Align the examples and regenerate catalogs
after rebasing onto main (application family count 11).
---------
Co-authored-by: Cursor Agent <cursoragent@cursor.com>
codesign echoes the executable path and signing identifier verbatim,
and an ad hoc identifier derives from the file name. A file name with
line breaks added forged Authority lines, a signed file named after
codesign's unsigned message was reported unsigned, and path text could
supply entitlements. Parse display fields after the exact echoed path
and identifier, classify unsigned output by exit status, and read
requirements and entitlements from stdout.
Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
plutil's JSON spells an integral <real> such as 9007199254740992 like an
<integer>, so the JSON path labeled it an exact integer. When the JSON
holds an unsafe integral number, read element types from plutil's XML
conversion; numbers whose origin stays ambiguous are reported as decoded
with an explicit limitation.
Co-authored-by: Claude Opus 5.5 <noreply@anthropic.com>
* feat(javascript): recover readable modules with Wakaru
Integrate pinned upstream source behind a typed optional recovery port,
preserve source identity and producer provenance, and publish verified
artifacts for existing JavaScript analysis through CLI and MCP.
Add focused real-tool CI with genuine bundler fixtures and bounded
resource, cancellation, cleanup, schema and packaged-artifact checks.
Assisted-by: Yukari (gensokyo-skills:yukari-boundary-analysis)
Assisted-by: Kogasa (gensokyo-skills:kogasa-surprise-testing)
* fix(javascript): align recovery catalog and browser verification
Share canonical Wakaru provider identity, describe CLI mode options, and
format the new workflow test. Disconnect the real page transport after
its observation readiness progress instead of a fixed delay.
Assisted-by: Yukari (gensokyo-skills:yukari-boundary-analysis)
Assisted-by: Kogasa (gensokyo-skills:kogasa-surprise-testing)
* refactor(javascript): consume the investigation evidence writer
Verify that the SDK recovery handler records complete Evidence through the newly shared investigation owner.
Assisted-by: Yukari (gensokyo-skills:yukari-boundary-analysis)
* chore(test): account for isolated recovery fixture compilers
* fix(javascript): validate recovery paths before acquiring the engine
Return field-specific invalid_format diagnostics for relative paths and verify compiled CLI/MCP parity even when the optional engine is unavailable.
Assisted-by: Yukari (gensokyo-skills:yukari-boundary-analysis)
Assisted-by: Kogasa (gensokyo-skills:kogasa-surprise-testing)
The XML fallback inferred an integer from `Number.isInteger`, so an
integral `<real>` beyond 2^53 was misreported as an unknown integer.
Read the `<integer>` and `<real>` literals from plutil's XML text instead:
an unsafe integral number that matches one `<integer>` literal and no
`<real>` gets its exact decimal; a number that could be either stays as
decoded with a limitation.
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
`inspect_plist` parsed plutil JSON with `JSON.parse`, silently rounding
integers outside ±(2^53 - 1): `18446744073709551615` became
`18446744073709552000` with no limitation. Keep the exact decimal text
from the JSON source as `{ "$plist_type": "integer", "decimal": "..." }`
and add a limitation. On the XML fallback path, the decoder has already
rounded such values, so they become `decimal: null` instead of a wrong
number.
Also restore the `` escape in the BOM regex, which an earlier
rewrite had turned into a raw invisible character.
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
`inspect_plist` converted every plist with `plutil -convert json`, which
rejects plists containing `<data>`, `<date>`, or non-finite `<real>`
values. Such valid plists (including Stocks.app's Info.plist) failed with
a cause-free `execution_failure`.
When the JSON conversion exits nonzero, decode `plutil -convert xml1`
instead. Data and dates use the `$plist_type` objects the keyed-archive
reader already emits; non-finite reals become an explicit unknown because
the XML decoder reports NaN and infinity alike. Provenance records both
conversions and limitations explain the representation. Plists that JSON
can express keep the unchanged single-conversion path.
The projection moves to `src/domain/plistValue.ts` and is shared with the
keyed-archive reader, which keeps rejecting non-finite reals.
Co-Authored-By: Claude Opus 5.5 <noreply@anthropic.com>
* feat(web): export captured scripts for JavaScript application analysis
Add capture adapters, conservative source path projection, verified exclusive publication and a shared CLI/MCP workflow. Retain source identities, missing content and competing URL versions in a complete manifest for existing static analysis.
Refs: #774Closes: #799
Assisted-by: Yukari (gensokyo-skills:yukari-boundary-analysis)
Assisted-by: Kogasa (gensokyo-skills:kogasa-surprise-testing)
* test(web): include script export in independent effect audit
Register the new contract family in the independent inventory audit and verify the filesystem, session, network and idempotence metadata of the named export contract.
Assisted-by: Yukari (gensokyo-skills:yukari-boundary-analysis)
Assisted-by: Kogasa (gensokyo-skills:kogasa-surprise-testing)
* fix(web): preserve capture limitation values in export manifests
Align the export boundary with passive capture’s string contract instead of rejecting an admitted empty limitation. Cover the publisher boundary and regenerate canonical schemas and identities.
Assisted-by: Yukari (gensokyo-skills:yukari-boundary-analysis)
Assisted-by: Kogasa (gensokyo-skills:kogasa-surprise-testing)
* docs(browser): add an interaction example that captures the visible result
Fixes#728
Co-authored-by: Cursor <cursoragent@cursor.com>
* docs(browser): wait for asynchronous search results before capture
---------
Co-authored-by: Cursor <cursoragent@cursor.com>
Co-authored-by: N0zoM1z0 <1705004398@qq.com>
* feat(ghidra): edit function annotations atomically
Return annotation readback and refreshed function analysis through CLI and MCP. Own each database transaction, invalidate caches and immutable snapshots, preserve executable bytes, and retain the Windows mutation boundary.
Assisted-by: Nitori (gensokyo-skills:nitori-reverse-engineering)
* fix(ghidra): preserve qualified function annotation identity
Preserve namespaces during local name writes and match qualified readback to the refreshed dossier. Add a producer-shaped regression and verify a real namespaced C++ function through the CLI.
Assisted-by: Nitori (gensokyo-skills:nitori-reverse-engineering)
* test(ghidra): align verification with annotation authority
Keep strict capability and profile checks while admitting the explicit session metadata operation. Verify packaged transport authority and atomic transaction commitments and preserve a read-only Windows expectation.
Assisted-by: Nitori (gensokyo-skills:nitori-reverse-engineering)
* feat(setup)!: expand agent integrations and simplify onboarding
Add native configuration formats for OpenCode, Antigravity, GitHub Copilot
CLI, VS Code, and Devin. Preserve JSONC comments and unrelated settings
while making setup and uninstall ownership-aware and idempotent.
Select agent targets before planning, separate discovery from intent, and
keep agent-only setup independent of optional provider prerequisites.
Cover configuration boundaries and interactive behavior in packaged checks.
BREAKING CHANGE: unscoped setup refreshes only existing REA-owned
registrations. Use --all-detected to configure every detected client.
Setup JSON contains a compact doctor summary; use rea doctor for full
diagnostics. Cancellation and successful dry runs now exit successfully.
* feat(cli)!: replace upgrade with verified updates
Resolve an exact release through npm's configured registry, update only the
identified installation, and verify its new executable before reporting success.
Return a read-only maintenance plan for existing enabled REA integrations.
BREAKING CHANGE: replace rea upgrade with rea update; no alias is retained.
Successful update JSON uses status "updated", reports the verified installed
version, and returns an unapplied maintenance plan instead of opening setup.
* fix(hopper): report unavailable procedure body coverage
* refactor!: simplify runtime tools and remove replay engines
Keep direct inspection, capture, and comparison tools. Bind handlers to named contracts and let agents compose experiments with commands and local fixture servers.
BREAKING CHANGE: Remove controlled replay, Node characterization, finite replay-machine, managed runtime planning, and redundant string-tracing tools. Retire process replay, shims, reactive scenarios, custom checkpoints, and active browser replay and origin-scope inputs.
* refactor(test): colocate pure-domain tests and reduce test debt
Move focused immutable domain/contracts/adapter tests from
tests/composition/** beside their production owners under src/** as
colocated *.test.ts/*.fixture.ts, and relocate persistence-shaped
composition tests under tests/boundary/filesystem/**. Update import
paths, the Vitest project topology (shared worker context for pure
domain/contracts and recording-port service projects), the test
migration ledger, testing docs, and AGENTS.md to match.
Generated with [Devin](https://devin.ai)
Co-Authored-By: Devin <158243242+devin-ai-integration[bot]@users.noreply.github.com>
* docs: remove test migration ledger
The cutover is complete and the ledger is no longer referenced anywhere
in source, scripts, or the docs gate. Drop the standalone artifact.
Generated with [Devin](https://devin.ai)
Co-Authored-By: Devin <158243242+devin-ai-integration[bot]@users.noreply.github.com>
* docs: clean up stale migration artifacts
Remove empty directories left by the test migration and replace the
"final cutover" language in docs/testing.md with standing PR guidance
that no longer references the completed migration.
Generated with [Devin](https://devin.ai)
Co-Authored-By: Devin <158243242+devin-ai-integration[bot]@users.noreply.github.com>
* fix: repair CI failures from schema, knip, and stale generated artifacts
Three root causes fixed:
1. catalog-schemas.mjs: valuesAt only traversed anyOf from Zod's
toJSONSchema, not oneOf. The webScreenshotDiffSchema change to a
discriminated union produces oneOf, so the product catalog generator
could not derive the web_screenshot_diff schema version. Add oneOf
traversal.
2. conformancePackage.ts: the test rewrite removed the only imports of
ScenarioManifest, ReplayPlan, ShimPlan, and ExpectedEvidence, making
them unused exports that knip flags. Remove the dead type aliases.
3. Regenerate stale artifacts (product catalog, MCP tool catalog, skill
metadata, conformance manifest) that drifted from the source changes.
Generated with [Devin](https://devin.ai)
Co-Authored-By: Devin <158243242+devin-ai-integration[bot]@users.noreply.github.com>
---------
Co-authored-by: Devin <158243242+devin-ai-integration[bot]@users.noreply.github.com>
morluto
Kaoru0822
N0zoM1z0
Rudy Mizrahi Celekli
Tufail Akram